Gene: Aco003996 (Ananas comosus)

Overview top

Gene Identifier
Aco003996
Transcript Identifier
Aco003996.1
Gene Type
Coding gene
Location
LG15 : 2151405-2155233 : positive

Family

Gene family
HOM04M001113
(127 genes in 29 species)
specific family
Subfamily
ORTHO04M001704
(87 genes in 29 species)
specific family

Descriptions

Description
DNA repair Rad51 family protein

Identifiers

Type Value
idAco003996.v3
pacid33030078
tidAco003996.1.v3
tidAco003996.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006259 IEAInterProDNA metabolic process
GO:0006281 IEAInterProDNA repair
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT5G20850
GO:0045003 IEAPLAZA Integrative Orthologydouble-strand break repair via synthesis-dependent strand annealingAT5G20850
GO:0010332 IEAPLAZA Integrative Orthologyresponse to gamma radiationAT5G20850
GO:0006302 IEAPLAZA Integrative Orthologydouble-strand break repairAT5G20850

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0005524 IEAInterProATP binding
GO:0008094 IEAInterProDNA-dependent ATPase activity
GO:0000166 IEAInterPronucleotide binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G20850

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G20850
GO:0005694 IEAPLAZA Integrative OrthologychromosomeAT5G20850

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR033925Rad51/DMC1/RadA
IPR013632DNA recombination and repair protein Rad51-like, C-terminal
IPR016467DNA recombination and repair protein, RecA-like
IPR020587DNA recombination and repair protein RecA, monomer-monomer interface
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domain
IPR003593AAA+ ATPase domain
IPR003583Helix-hairpin-helix DNA-binding motif, class 1
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR010995DNA repair Rad51/transcription factor NusA, alpha-helical

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.