Gene: Aco003085 (Ananas comosus)

Overview top

Gene Identifier
Aco003085
Transcript Identifier
Aco003085.1
Gene Type
Coding gene
Location
LG06 : 13721722-13735467 : negative

Family

Gene family
HOM04M003010
(55 genes in 29 species)
specific family

Descriptions

Description
Ribosomal RNA small subunit methyltransferase F

Identifiers

Type Value
idAco003085.v3
pacid33040128
tidAco003085.1.v3
tidAco003085.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006364 IEAInterProrRNA processing
GO:0008283 IEAPLAZA Integrative Orthologycell proliferationAT5G55920
GO:0009965 IEAPLAZA Integrative Orthologyleaf morphogenesisAT5G55920
GO:0010015 IEAPLAZA Integrative Orthologyroot morphogenesisAT5G55920

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008168 IEAInterPromethyltransferase activity
GO:0003723 IEAInterProRNA binding
GO:0008757 IEAInterProS-adenosylmethionine-dependent methyltransferase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT5G55920
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT4G26600

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004853Sugar phosphate transporter domain
IPR001678SAM-dependent methyltransferase RsmB/NOP2-type
IPR031341Ribosomal RNA small subunit methyltransferase F, N-terminal
IPR023273RNA (C5-cytosine) methyltransferase, NOP2
IPR023267RNA (C5-cytosine) methyltransferase
IPR018314Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site
IPR029063S-adenosyl-L-methionine-dependent methyltransferase
IPR011023Nop2p

Mapman id Description
17.1.2.2.3.6.Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.60S ribosomal subunit cytoplasmic maturation.maturation factor (OLI2)
No SignalP domains detected for this gene.