Gene: Aco002999 (Ananas comosus)

Overview top

Gene Identifier
Aco002999
Transcript Identifier
Aco002999.1
Gene Type
Coding gene
Location
LG06 : 13149031-13154700 : positive

Family

Gene family
HOM04M001223
(118 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Rad23 UV excision repair protein family

Identifiers

Type Value
idAco002999.v3
pacid33040806
tidAco002999.1.v3
tidAco002999.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006289 IEAInterPronucleotide-excision repair
GO:0043161 IEAInterProproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT5G38470

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003684 IEAInterProdamaged DNA binding
GO:0005515 IEAInterProprotein binding
GO:0070628 IEAPLAZA Integrative Orthologyproteasome bindingAT5G38470
GO:0043130 IEAPLAZA Integrative Orthologyubiquitin bindingAT5G38470
GO:0031593 IEAPLAZA Integrative Orthologypolyubiquitin bindingAT5G38470

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAInterPronucleus
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT5G38470
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT5G38470

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR015360XPC-binding domain
IPR000626Ubiquitin domain
IPR015940Ubiquitin-associated domain
IPR004806UV excision repair protein Rad23
IPR006636Heat shock chaperonin-binding
IPR029071Ubiquitin-related domain
IPR009060UBA-like

Mapman id Description
19.2.4.4.1.Protein homeostasis.ubiquitin-proteasome system.ER-associated protein degradation (ERAD).delivery to proteasome.shuttle protein (RAD23)
No SignalP domains detected for this gene.