Gene: Aco002493 (Ananas comosus)

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Gene Identifier
Aco002493
Transcript Identifier
Aco002493.1
Gene Type
Coding gene
Location
LG04 : 1182085-1192935 : positive

Family

Gene family
HOM04M000012
(2892 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
RING finger protein

Identifiers

Type Value
idAco002493.v3
pacid33044367
tidAco002493.1.v3
tidAco002493.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008283 IEAPLAZA Integrative Orthologycell proliferationAT3G62690
GO:1901000 IEAPLAZA Integrative Orthologyregulation of response to salt stressAT5G58580
GO:0006461 IEAPLAZA Integrative Orthologyprotein complex assemblyAT3G62690
GO:1903426 IEAPLAZA Integrative Orthologyregulation of reactive oxygen species biosynthetic processAT5G58580
GO:0042255 IEAPLAZA Integrative Orthologyribosome assemblyAT3G62690
GO:0042256 IEAPLAZA Integrative Orthologymature ribosome assemblyAT3G62690
GO:0009955 IEAPLAZA Integrative Orthologyadaxial/abaxial pattern specificationAT3G62690
GO:0009735 IEAPLAZA Integrative Orthologyresponse to cytokininAT3G62690
GO:0006913 IEAPLAZA Integrative Orthologynucleocytoplasmic transportAT3G62690
GO:0071470 IEAPLAZA Integrative Orthologycellular response to osmotic stressAT5G58580
GO:0030100 IEAPLAZA Integrative Orthologyregulation of endocytosisAT5G58580
GO:0010015 IEAPLAZA Integrative Orthologyroot morphogenesisAT3G62690
GO:0009965 IEAPLAZA Integrative Orthologyleaf morphogenesisAT3G62690
GO:0010200 IEAPLAZA Integrative Orthologyresponse to chitinAT4G15975

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008097 IEAPLAZA Integrative Orthology5S rRNA bindingAT3G62690
GO:0031625 IEAPLAZA Integrative Orthologyubiquitin protein ligase bindingAT5G58580
GO:0003735 IEAPLAZA Integrative Orthologystructural constituent of ribosomeAT3G62690

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0022626 IEAPLAZA Integrative Orthologycytosolic ribosomeAT3G62690
GO:0022625 IEAPLAZA Integrative Orthologycytosolic large ribosomal subunitAT3G62690
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT3G62690
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT3G62690
GO:0005798 IEAPLAZA Integrative OrthologyGolgi-associated vesicleAT5G58580
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT3G62690
GO:0005769 IEAPLAZA Integrative Orthologyearly endosomeAT5G58580
GO:0005768 IEAPLAZA Integrative OrthologyendosomeAT5G58580
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT3G62690
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT3G62690
GO:0042788 IEAPLAZA Integrative Orthologypolysomal ribosomeAT3G62690
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT3G62690
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT3G62690
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT3G62690

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

Mapman id Description
19.2.2.1.5.3.3.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class E3 ligase
No SignalP domains detected for this gene.