Gene: Aco001996 (Ananas comosus)

Overview top

Gene Identifier
Aco001996
Transcript Identifier
Aco001996.1
Gene Type
Coding gene
Location
LG18 : 5965215-5971904 : positive

Family

Gene family
HOM04M000133
(668 genes in 29 species)
specific family
Subfamily
ORTHO04M005200
(42 genes in 29 species)
specific family

Descriptions

Description
tubulin beta chain 4

Identifiers

Type Value
idAco001996.v3
pacid33029255
tidAco001996.1.v3
tidAco001996.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007020 IEAInterPromicrotubule nucleation
GO:0031122 IEAInterProcytoplasmic microtubule organization
GO:0007017 IEAInterPromicrotubule-based process
GO:0010103 IEAPLAZA Integrative Orthologystomatal complex morphogenesisAT3G61650
GO:0033566 IEAPLAZA Integrative Orthologygamma-tubulin complex localizationAT5G05620
GO:0048366 IEAPLAZA Integrative Orthologyleaf developmentAT3G61650
GO:0051641 IEAPLAZA Integrative Orthologycellular localizationAT3G61650
GO:0009624 IEAPLAZA Integrative Orthologyresponse to nematodeAT3G61650
GO:0009553 IEAPLAZA Integrative Orthologyembryo sac developmentAT3G61650
GO:0090063 IEAPLAZA Integrative Orthologypositive regulation of microtubule nucleationAT5G05620
GO:0048229 IEAPLAZA Integrative Orthologygametophyte developmentAT5G05620
GO:0000911 IEAPLAZA Integrative Orthologycytokinesis by cell plate formationAT3G61650
GO:0048768 IEAPLAZA Integrative Orthologyroot hair cell tip growthAT3G61650
GO:0000914 IEAPLAZA Integrative Orthologyphragmoplast assemblyAT3G61650

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003924 IEAInterProGTPase activity
GO:0005525 IEAInterProGTP binding
GO:0005200 IEAPLAZA Homology (enrichment)structural constituent of cytoskeleton

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000930 IEAInterProgamma-tubulin complex
GO:0005874 IEAInterPromicrotubule
GO:0055028 IEAPLAZA Integrative Orthologycortical microtubuleAT5G05620
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT5G05620
GO:0005618 IEAPLAZA Integrative Orthologycell wallAT5G05620
GO:0005938 IEAPLAZA Integrative Orthologycell cortexAT3G61650
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT3G61650
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT3G61650
GO:0005635 IEAPLAZA Integrative Orthologynuclear envelopeAT5G05620
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT3G61650
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT3G61650

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002454Gamma tubulin
IPR018316Tubulin/FtsZ, 2-layer sandwich domain
IPR003008Tubulin/FtsZ, GTPase domain
IPR000217Tubulin
IPR017975Tubulin, conserved site
IPR008280Tubulin/FtsZ, C-terminal

Mapman id Description
20.1.2.1.1.Cytoskeleton organisation.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin Ring Complex (gamma-TuRC).gamma tubulin component TUG1
No SignalP domains detected for this gene.