Gene: Aco000732 (Ananas comosus)

Overview top

Gene Identifier
Aco000732
Transcript Identifier
Aco000732.1
Gene Type
Coding gene
Location
LG02 : 17112634-17114422 : positive

Family

Gene family
HOM04M001122
(126 genes in 29 species)
specific family
Subfamily
ORTHO04M001866
(83 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Splicing factor U2AF 35 kDa subunit

Identifiers

Type Value
idAco000732.v3
pacid33036686
tidAco000732.1.v3
tidAco000732.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000398 IEAInterPromRNA splicing, via spliceosome
GO:0048573 IEAPLAZA Integrative Orthologyphotoperiodism, floweringAT5G42820

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003723 IEAInterProRNA binding
GO:0046872 IEAInterPrometal ion binding
GO:0003676 IEAInterPronucleic acid binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0089701 IEAInterProU2AF
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G42820

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR009145U2 auxiliary factor small subunit
IPR000571Zinc finger, CCCH-type
IPR000504RNA recognition motif domain

Mapman id Description
16.4.1.2.11.1.RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).U2AF pre-RNA splicing auxiliary factor heterodimer.small subunit U2AF1/U2AF35
No SignalP domains detected for this gene.