Gene: Aco000173 (Ananas comosus)

Overview top

Gene Identifier
Aco000173
Transcript Identifier
Aco000173.1
Gene Type
Coding gene
Location
LG12 : 4009598-4014358 : positive

Family

Gene family
HOM04M001313
(111 genes in 29 species)
specific family
Subfamily
ORTHO04M004561
(45 genes in 26 species)
specific family

Descriptions

Description
Nuclear pore complex protein Nup98-Nup96

Identifiers

Type Value
idAco000173.v3
pacid33043028
tidAco000173.1.v3
tidAco000173.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006810 IEAInterProtransport
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT1G80680
GO:0009870 IEAPLAZA Integrative Orthologydefense response signaling pathway, resistance gene-dependentAT1G80680
GO:0006406 IEAPLAZA Integrative OrthologymRNA export from nucleusAT1G80680

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G80680

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005643 IEAInterPronuclear pore
GO:0031965 IEAPLAZA Integrative Orthologynuclear membraneAT1G80680
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G80680
GO:0005635 IEAPLAZA Integrative Orthologynuclear envelopeAT1G80680

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007230Peptidase S59, nucleoporin
IPR021967Nuclear protein 96

Mapman id Description
23.5.1.1.1.4.Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.scaffold nucleoporin (NUP96)
No SignalP domains detected for this gene.