Gene: ATR1147G041 (Amborella trichopoda)

Overview top

Gene Identifier
ATR1147G041
Transcript Identifier
ATR1147G041.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00087 : 1124040-1154055 : positive

Family

Gene family
HOM04M000001
(8521 genes in 28 species)
specific family
Subfamily
ORTHO04M008152
(31 genes in 26 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00087.31
idevm_27.TU.AmTr_v1.0_scaffold00087.31.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00087.31
nameevm_27.model.AmTr_v1.0_scaffold00087.31
pacid31559867
tidevm_27.model.AmTr_v1.0_scaffold00087.31.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0030041 IEAInterProactin filament polymerization
GO:0030833 IEAInterProregulation of actin filament polymerization
GO:0034314 IEAInterProArp2/3 complex-mediated actin nucleation
GO:0007112 IEAPLAZA Integrative Orthologymale meiosis cytokinesisAT4G14147
GO:0007015 IEAPLAZA Integrative Orthologyactin filament organizationAT4G14147
GO:0055046 IEAPLAZA Integrative OrthologymicrogametogenesisAT4G14147
GO:0045010 IEAPLAZA Integrative Orthologyactin nucleationAT4G14147
GO:0000902 IEAPLAZA Integrative Orthologycell morphogenesisAT4G14147
GO:0080175 IEAPLAZA Integrative Orthologyphragmoplast microtubule organizationAT4G14147

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT4G14147

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005885 IEAInterProArp2/3 protein complex
GO:0015629 IEAInterProactin cytoskeleton
GO:0009524 IEAPLAZA Integrative OrthologyphragmoplastAT4G14147

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR034666Arp2/3 complex subunit 2/4
IPR008384Actin-related protein 2/3 complex subunit 4

Mapman id Description
20.2.2.1.6.Cytoskeleton organisation.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.component ArpC4
No SignalP domains detected for this gene.