Gene: ATR1136G155 (Amborella trichopoda)

Overview top

Gene Identifier
ATR1136G155
Transcript Identifier
ATR1136G155.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00071 : 744303-763252 : negative

Family

Gene family
HOM04M001285
(113 genes in 29 species)
specific family
Subfamily
ORTHO04M003203
(58 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00071.39
idevm_27.TU.AmTr_v1.0_scaffold00071.39.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00071.39
nameevm_27.model.AmTr_v1.0_scaffold00071.39
pacid31561153
tidevm_27.model.AmTr_v1.0_scaffold00071.39.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006430 IEAInterProlysyl-tRNA aminoacylation
GO:0006418 IEAInterProtRNA aminoacylation for protein translation

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166 IEAInterPronucleotide binding
GO:0004824 IEAInterProlysine-tRNA ligase activity
GO:0005524 IEAInterProATP binding
GO:0004812 IEAInterProaminoacyl-tRNA ligase activity
GO:0003676 IEAInterPronucleic acid binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IEAInterProcytoplasm
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT3G11710
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT3G11710

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR018149Lysyl-tRNA synthetase, class II, C-terminal
IPR002313Lysine-tRNA ligase, class II
IPR004364Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR034762Bacterial/eukaryotic lysine-tRNA ligase, class II
IPR006195Aminoacyl-tRNA synthetase, class II
IPR012340Nucleic acid-binding, OB-fold

Mapman id Description
17.2.13.Protein biosynthesis.aminoacyl-tRNA synthetase activities.lysine-tRNA ligase
No SignalP domains detected for this gene.