Gene: ATR1128G008 (Amborella trichopoda)

Overview top

Gene Identifier
ATR1128G008
Transcript Identifier
ATR1128G008.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00074 : 1323544-1330408 : negative

Family

Gene family
HOM04M001060
(132 genes in 27 species)
specific family
Subfamily
ORTHO04M001128
(113 genes in 27 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00074.29
idevm_27.TU.AmTr_v1.0_scaffold00074.29.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00074.29
nameevm_27.model.AmTr_v1.0_scaffold00074.29
pacid31575739
tidevm_27.model.AmTr_v1.0_scaffold00074.29.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016311 IEAInterProdephosphorylation
GO:1900424 IEAPLAZA Integrative Orthologyregulation of defense response to bacteriumAT4G03960

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004725 IEAInterProprotein tyrosine phosphatase activity
GO:0016791 IEAPLAZA Integrative Orthologyphosphatase activityAT5G16480

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IEAPLAZA Tree-based OrthologycytoplasmAT3G02800
GO:0005634 IEAPLAZA Tree-based OrthologynucleusAT3G02800

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR029021Protein-tyrosine phosphatase-like
IPR004861Protein-tyrosine phosphatase, SIW14-like
IPR020428Protein-tyrosine phosphatase SIW14-like, eukaryotic
IPR016130Protein-tyrosine phosphatase, active site

Mapman id Description
18.4.23.2.6.Protein modification.phosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase activities.atypical dual-specificity phosphatase (PFA-DSP)
No SignalP domains detected for this gene.