Gene: ATR1120G115 (Amborella trichopoda)

Overview top

Gene Identifier
ATR1120G115
Transcript Identifier
ATR1120G115.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00078 : 3544768-3546132 : negative

Family

Gene family
HOM04M003653
(47 genes in 27 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00078.205
idevm_27.TU.AmTr_v1.0_scaffold00078.205.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00078.205
nameevm_27.model.AmTr_v1.0_scaffold00078.205
pacid31555289
tidevm_27.model.AmTr_v1.0_scaffold00078.205.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0046907 IEAInterProintracellular transport

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G52380

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005643 IEAInterPronuclear pore
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT1G52380
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G52380

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011993PH domain-like
IPR015007Nuclear pore complex, NUP2/50/61
IPR000156Ran binding domain

Mapman id Description
23.5.1.1.5.1.Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.nucleoporin (NUP50)
No SignalP domains detected for this gene.