Gene: ATR0924G001 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0924G001
Transcript Identifier
ATR0924G001.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00456 : 10685-12434 : negative

Family

Gene family
HOM04M004706
(40 genes in 18 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00456.1
idevm_27.TU.AmTr_v1.0_scaffold00456.1.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00456.1
nameevm_27.model.AmTr_v1.0_scaffold00456.1
pacid31570274
tidevm_27.model.AmTr_v1.0_scaffold00456.1.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114 IEAInterProoxidation-reduction process
GO:0009772 IEAPLAZA Integrative Orthologyphotosynthetic electron transport in photosystem IIATCG01110

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016651 IEAInterProoxidoreductase activity, acting on NAD(P)H
GO:0048038 IEAInterProquinone binding
GO:0051287 IEAInterProNAD binding
GO:0003959 IEAPLAZA Integrative OrthologyNADPH dehydrogenase activityATCG01110

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020 IEAInterPromembrane
GO:0009535 IEAPLAZA Integrative Orthologychloroplast thylakoid membraneATCG01110
GO:0009534 IEAPLAZA Integrative Orthologychloroplast thylakoidATCG01110
GO:0009507 IEAPLAZA Integrative OrthologychloroplastATCG01110
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaATCG01110

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR029014NiFe hydrogenase-like
IPR001135NADH-quinone oxidoreductase, subunit D
IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H
IPR014029NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site
IPR018086NADH:ubiquinone oxidoreductase, subunit 1, conserved site

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.