Gene: ATR0824G264 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0824G264
Transcript Identifier
ATR0824G264.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00049 : 4197280-4199553 : positive

Family

Gene family
HOM04M005702
(35 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00049.245
idevm_27.TU.AmTr_v1.0_scaffold00049.245.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00049.245
nameevm_27.model.AmTr_v1.0_scaffold00049.245
pacid31574796
tidevm_27.model.AmTr_v1.0_scaffold00049.245.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010212 IEAPLAZA Integrative Orthologyresponse to ionizing radiationAT3G52115
GO:0010112 IEAPLAZA Integrative Orthologyregulation of systemic acquired resistanceAT3G52115
GO:0006974 IEAPLAZA Integrative Orthologycellular response to DNA damage stimulusAT3G52115
GO:0007276 IEAPLAZA Integrative Orthologygamete generationAT3G52115
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT3G52115
GO:0009694 IEAPLAZA Integrative Orthologyjasmonic acid metabolic processAT3G52115
GO:0000706 IEAPLAZA Integrative Orthologymeiotic DNA double-strand break processingAT3G52115
GO:0006979 IEAPLAZA Integrative Orthologyresponse to oxidative stressAT3G52115

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:1990206 IEAPLAZA Integrative Orthologyjasmonyl-Ile conjugate hydrolase activityAT3G52115
GO:0003858 IEAPLAZA Integrative Orthology3-hydroxybutyrate dehydrogenase activityAT3G52115

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT3G52115

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR033316DNA endonuclease RBBP8-like

Mapman id Description
13.3.6.3.3.Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic double strand break processing.ssDNA endonuclease (COM1/SAE2)
14.3.7.DNA damage response.homologous recombination repair (HR).auxiliary protein (COM1)
No SignalP domains detected for this gene.