Gene: ATR0824G178 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0824G178
Transcript Identifier
ATR0824G178.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00049 : 3478790-3483566 : positive

Family

Gene family
HOM04M001126
(126 genes in 29 species)
specific family
Subfamily
ORTHO04M001898
(82 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00049.204
idevm_27.TU.AmTr_v1.0_scaffold00049.204.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00049.204
nameevm_27.model.AmTr_v1.0_scaffold00049.204
pacid31574607
tidevm_27.model.AmTr_v1.0_scaffold00049.204.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006412 IEAInterProtranslation

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003735 IEAInterProstructural constituent of ribosome
GO:0003729 IEAPLAZA Integrative OrthologymRNA bindingAT2G45710

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622 IEAInterProintracellular
GO:0005840 IEAInterProribosome
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT5G47930
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT2G45710
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT2G45710
GO:0005618 IEAPLAZA Integrative Orthologycell wallAT3G61110
GO:0022627 IEAPLAZA Integrative Orthologycytosolic small ribosomal subunitAT3G61110
GO:0022626 IEAPLAZA Integrative Orthologycytosolic ribosomeAT3G61110
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT3G61110

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR023407Ribosomal protein S27e, zinc-binding domain
IPR000592Ribosomal protein S27e
IPR011332Zinc-binding ribosomal protein

Mapman id Description
17.1.3.1.28.Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS27
No SignalP domains detected for this gene.