Gene: ATR0824G023 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0824G023
Transcript Identifier
ATR0824G023.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00049 : 3804177-3811624 : negative

Family

Gene family
HOM04M000201
(461 genes in 28 species)
specific family
Subfamily
ORTHO04M000157
(384 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00049.220
idevm_27.TU.AmTr_v1.0_scaffold00049.220.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00049.220
nameevm_27.model.AmTr_v1.0_scaffold00049.220
pacid31574578
tidevm_27.model.AmTr_v1.0_scaffold00049.220.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114 IEAInterProoxidation-reduction process
GO:0048653 IEAPLAZA Integrative Orthologyanther developmentAT1G72520
GO:0009617 IEAPLAZA Integrative Orthologyresponse to bacteriumAT1G72520
GO:0040007 IEAPLAZA Integrative OrthologygrowthAT1G72520
GO:0006952 IEAPLAZA Integrative Orthologydefense responseAT1G72520
GO:0009901 IEAPLAZA Integrative Orthologyanther dehiscenceAT1G72520
GO:0009620 IEAPLAZA Integrative Orthologyresponse to fungusAT1G17420
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT1G17420
GO:0009555 IEAPLAZA Integrative Orthologypollen developmentAT1G72520
GO:0009644 IEAPLAZA Integrative Orthologyresponse to high light intensityAT1G17420
GO:0009611 IEAPLAZA Integrative Orthologyresponse to woundingAT1G72520
GO:0010193 IEAPLAZA Integrative Orthologyresponse to ozoneAT1G72520
GO:0034440 IEAPLAZA Integrative Orthologylipid oxidationAT1G72520
GO:0009695 IEAPLAZA Integrative Orthologyjasmonic acid biosynthetic processAT1G72520
GO:0080086 IEAPLAZA Integrative Orthologystamen filament developmentAT1G72520

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0016702 IEAInterProoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0046872 IEAInterPrometal ion binding
GO:0016491 IEAInterProoxidoreductase activity
GO:0016165 IEAPLAZA Integrative Orthologylinoleate 13S-lipoxygenase activityAT1G72520

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT1G67560
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT1G67560

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001024PLAT/LH2 domain
IPR027433Lipoxygenase, domain 3
IPR000907Lipoxygenase
IPR013819Lipoxygenase, C-terminal
IPR001246Lipoxygenase, plant
IPR020833Lipoxygenase, iron binding site

Mapman id Description
11.7.1.2.Phytohormone action.jasmonic acid.biosynthesis.13-lipoxygenase
No SignalP domains detected for this gene.