Gene: ATR0820G037 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0820G037
Transcript Identifier
ATR0820G037.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00040 : 4003447-4015307 : positive

Family

Gene family
HOM04M000024
(1879 genes in 29 species)
specific family
Subfamily
ORTHO04M000256
(300 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00040.219
idevm_27.TU.AmTr_v1.0_scaffold00040.219.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00040.219
nameevm_27.model.AmTr_v1.0_scaffold00040.219
pacid31568083
tidevm_27.model.AmTr_v1.0_scaffold00040.219.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006468 IEAInterProprotein phosphorylation
GO:2000035 IEAPLAZA Integrative Orthologyregulation of stem cell divisionAT5G03730
GO:2000069 IEAPLAZA Integrative Orthologyregulation of post-embryonic root developmentAT5G03730
GO:0010105 IEAPLAZA Integrative Orthologynegative regulation of ethylene-activated signaling pathwayAT5G03730
GO:0048510 IEAPLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phaseAT5G03730
GO:0001666 IEAPLAZA Integrative Orthologyresponse to hypoxiaAT5G03730
GO:0009744 IEAPLAZA Integrative Orthologyresponse to sucroseAT5G03730
GO:0009723 IEAPLAZA Integrative Orthologyresponse to ethyleneAT5G03730
GO:0071281 IEAPLAZA Integrative Orthologycellular response to iron ionAT5G03730
GO:0009686 IEAPLAZA Integrative Orthologygibberellin biosynthetic processAT5G03730
GO:0046777 IEAPLAZA Integrative Orthologyprotein autophosphorylationAT5G03730
GO:0010182 IEAPLAZA Integrative Orthologysugar mediated signaling pathwayAT5G03730
GO:0009750 IEAPLAZA Integrative Orthologyresponse to fructoseAT5G03730

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004672 IEAInterProprotein kinase activity
GO:0005524 IEAInterProATP binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G03730
GO:0004674 IEAPLAZA Integrative Orthologyprotein serine/threonine kinase activityAT5G03730

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005789 IEAPLAZA Integrative Orthologyendoplasmic reticulum membraneAT5G03730

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR028324Serine/threonine-protein kinase CTR1
IPR001245Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR008271Serine/threonine-protein kinase, active site
IPR017441Protein kinase, ATP binding site
IPR000719Protein kinase domain
IPR011009Protein kinase-like domain

Mapman id Description
11.5.2.2.Phytohormone action.ethylene.perception and signal transduction.protein kinase (CTR1)
18.4.1.30.Protein modification.phosphorylation.TKL protein kinase superfamily.protein kinase (MAP3K-RAF)
No SignalP domains detected for this gene.