Gene: ATR0810G282 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0810G282
Transcript Identifier
ATR0810G282.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00041 : 1457653-1463590 : negative

Family

Gene family
HOM04M001025
(135 genes in 29 species)
specific family
Subfamily
ORTHO04M001689
(88 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00041.79
idevm_27.TU.AmTr_v1.0_scaffold00041.79.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00041.79
nameevm_27.model.AmTr_v1.0_scaffold00041.79
pacid31559808
tidevm_27.model.AmTr_v1.0_scaffold00041.79.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000398 IEAPLAZA Integrative OrthologymRNA splicing, via spliceosomeAT3G61860

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676 IEAInterPronucleic acid binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT2G46610

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016607 IEAPLAZA Integrative Orthologynuclear speckAT3G61860
GO:0005681 IEAPLAZA Integrative Orthologyspliceosomal complexAT3G61860

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000504RNA recognition motif domain

Mapman id Description
16.4.6.3.RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (RS31|40|41)
No SignalP domains detected for this gene.