Gene: ATR0807G145 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0807G145
Transcript Identifier
ATR0807G145.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00044 : 320296-333892 : negative

Family

Gene family
HOM04M001399
(105 genes in 29 species)
specific family
Subfamily
ORTHO04M001915
(82 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00044.14
idevm_27.TU.AmTr_v1.0_scaffold00044.14.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00044.14
nameevm_27.model.AmTr_v1.0_scaffold00044.14
pacid31575577
tidevm_27.model.AmTr_v1.0_scaffold00044.14.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006696 IEAInterProergosterol biosynthetic process
GO:0009058 IEAInterProbiosynthetic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004310 IEAInterProfarnesyl-diphosphate farnesyltransferase activity
GO:0051996 IEAInterProsqualene synthase activity
GO:0016740 IEAInterProtransferase activity
GO:0016765 IEAInterProtransferase activity, transferring alkyl or aryl (other than methyl) groups

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR033904Trans-Isoprenyl Diphosphate Synthases, head-to-head
IPR008949Isoprenoid synthase domain
IPR002060Squalene/phytoene synthase
IPR019845Squalene/phytoene synthase, conserved site

Mapman id Description
9.1.6.1.1.Secondary metabolism.terpenoids.carotenoid biosynthesis.carotenes.phytoene synthase (PSY)
No SignalP domains detected for this gene.