Gene: ATR0800G174 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0800G174
Transcript Identifier
ATR0800G174.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00046 : 896247-908112 : positive

Family

Gene family
HOM04M002472
(65 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00046.35
idevm_27.TU.AmTr_v1.0_scaffold00046.35.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00046.35
nameevm_27.model.AmTr_v1.0_scaffold00046.35
pacid31553516
tidevm_27.model.AmTr_v1.0_scaffold00046.35.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010029 IEAInterProregulation of seed germination
GO:0016567 IEAInterProprotein ubiquitination

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004842 IEAInterProubiquitin-protein transferase activity
GO:0008270 IEAInterProzinc ion binding
GO:0046982 IEAPLAZA Integrative Orthologyprotein heterodimerization activityAT2G42160

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000151 IEAInterProubiquitin ligase complex

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR033273RING domain containing protein BRIZ1
IPR011422BRCA1-associated 2
IPR001607Zinc finger, UBP-type

Mapman id Description
19.2.2.1.5.3.3.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class E3 ligase
No SignalP domains detected for this gene.