Gene: ATR0800G167 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0800G167
Transcript Identifier
ATR0800G167.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00046 : 688376-721460 : positive

Family

Gene family
HOM04M000054
(1357 genes in 27 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00046.26
idevm_27.TU.AmTr_v1.0_scaffold00046.26.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00046.26
nameevm_27.model.AmTr_v1.0_scaffold00046.26
pacid31553527
tidevm_27.model.AmTr_v1.0_scaffold00046.26.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010047 IEAPLAZA Integrative Orthologyfruit dehiscenceAT5G67110
GO:0010114 IEAPLAZA Integrative Orthologyresponse to red lightAT4G36930
GO:0007623 IEAPLAZA Integrative Orthologycircadian rhythmAT4G36930
GO:0010154 IEAPLAZA Integrative Orthologyfruit developmentAT4G36930
GO:0010187 IEAPLAZA Integrative Orthologynegative regulation of seed germinationAT4G36930
GO:0048440 IEAPLAZA Integrative Orthologycarpel developmentAT4G36930
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT4G36930

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046983 IEAInterProprotein dimerization activity
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT4G36930
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT5G67110

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G67110

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain

Mapman id Description
15.5.32.RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)
No SignalP domains detected for this gene.