Gene: ATR0796G091 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0796G091
Transcript Identifier
ATR0796G091.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00045 : 2134703-2136296 : positive

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00045.155
idevm_27.TU.AmTr_v1.0_scaffold00045.155.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00045.155
nameevm_27.model.AmTr_v1.0_scaffold00045.155
pacid31567593
tidevm_27.model.AmTr_v1.0_scaffold00045.155.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010089 IEAPLAZA Integrative Orthologyxylem developmentAT1G09540
GO:0010214 IEAPLAZA Integrative Orthologyseed coat developmentAT1G09540
GO:0001944 IEAPLAZA Integrative Orthologyvasculature developmentAT1G09540
GO:0010119 IEAPLAZA Integrative Orthologyregulation of stomatal movementAT1G09540
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT5G26660
GO:0009739 IEAPLAZA Integrative Orthologyresponse to gibberellinAT1G57560
GO:0048364 IEAPLAZA Integrative Orthologyroot developmentAT1G09540
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT1G09540
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT1G57560
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT4G01680
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT1G57560

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT1G09540
GO:0044212 IEAPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT4G01680

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.