Gene: ATR0782G218 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0782G218
Transcript Identifier
ATR0782G218.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00038 : 3132395-3134581 : negative

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00038.125
idevm_27.TU.AmTr_v1.0_scaffold00038.125.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00038.125
nameevm_27.model.AmTr_v1.0_scaffold00038.125
pacid31570915
tidevm_27.model.AmTr_v1.0_scaffold00038.125.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0050826 IEAPLAZA Integrative Orthologyresponse to freezingAT2G31180
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT2G31180
GO:0071365 IEAPLAZA Integrative Orthologycellular response to auxin stimulusAT1G34670
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT5G16770
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT2G31180
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT1G34670
GO:0009723 IEAPLAZA Integrative Orthologyresponse to ethyleneAT2G31180
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT3G02940
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT2G31180
GO:1901332 IEAPLAZA Integrative Orthologynegative regulation of lateral root developmentAT1G34670
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT2G31180

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT2G31180

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT2G31180

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.