Gene: ATR0772G145 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0772G145
Transcript Identifier
ATR0772G145.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00030 : 2904437-2920065 : positive

Family

Gene family
HOM04M001014
(137 genes in 26 species)
specific family
Subfamily
ORTHO04M001181
(108 genes in 26 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00030.109
idevm_27.TU.AmTr_v1.0_scaffold00030.109.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00030.109
nameevm_27.model.AmTr_v1.0_scaffold00030.109
pacid31556507
tidevm_27.model.AmTr_v1.0_scaffold00030.109.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0048364 IEAInterProroot development
GO:0010089 IEAPLAZA Integrative Orthologyxylem developmentAT2G27230
GO:0010078 IEAPLAZA Integrative Orthologymaintenance of root meristem identityAT2G27230
GO:0048316 IEAPLAZA Tree-based Orthologyseed developmentAT1G64625
GO:0010479 IEAPLAZA Integrative Orthologystele developmentAT2G27230
GO:0007140 IEAPLAZA Tree-based Orthologymale meiotic nuclear divisionAT1G64625
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT2G27230
GO:0071365 IEAPLAZA Tree-based Orthologycellular response to auxin stimulusAT1G64625
GO:0090058 IEAPLAZA Tree-based Orthologymetaxylem developmentAT1G64625
GO:0051321 IEAPLAZA Tree-based Orthologymeiotic cell cycleAT1G64625

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046983 IEAInterProprotein dimerization activity
GO:0003700 IEAInterProtranscription factor activity, sequence-specific DNA binding
GO:0042803 IEAPLAZA Integrative Orthologyprotein homodimerization activityAT2G27230

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAInterPronucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
IPR033260Transcription factor LHW
IPR025610Transcription factor MYC/MYB N-terminal

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.