Gene: ATR0767G020 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0767G020
Transcript Identifier
ATR0767G020.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00033 : 302111-316733 : positive

Family

Gene family
HOM04M000669
(191 genes in 27 species)
specific family
Subfamily
ORTHO04M001537
(93 genes in 27 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00033.15
idevm_27.TU.AmTr_v1.0_scaffold00033.15.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00033.15
nameevm_27.model.AmTr_v1.0_scaffold00033.15
pacid31561713
tidevm_27.model.AmTr_v1.0_scaffold00033.15.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010584 IEAPLAZA Integrative Orthologypollen exine formationAT1G27600
GO:0009834 IEAPLAZA Integrative Orthologyplant-type secondary cell wall biogenesisAT1G27600
GO:0010413 IEAPLAZA Tree-based Orthologyglucuronoxylan metabolic processAT2G37090
GO:0010417 IEAPLAZA Integrative Orthologyglucuronoxylan biosynthetic processAT1G27600
GO:0045492 IEAPLAZA Integrative Orthologyxylan biosynthetic processAT1G27600

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0015018 IEAInterProgalactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity
GO:0042285 IEAPLAZA Integrative Orthologyxylosyltransferase activityAT1G27600

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020 IEAInterPromembrane
GO:0005794 IEAPLAZA Integrative OrthologyGolgi apparatusAT1G27600

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR005027Glycosyl transferase, family 43
IPR029044Nucleotide-diphospho-sugar transferases

Mapman id Description
21.2.2.1.3.1.Cell wall organisation.hemicellulose.xylan.biosynthesis.xylosyltransferase activities.xylosyltransferase (IRX9)
No SignalP domains detected for this gene.