Gene: ATR0751G171 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0751G171
Transcript Identifier
ATR0751G171.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00061 : 1364257-1365280 : positive

Family

Gene family
HOM04M003432
(50 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00061.83
idevm_27.TU.AmTr_v1.0_scaffold00061.83.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00061.83
nameevm_27.model.AmTr_v1.0_scaffold00061.83
pacid31564966
tidevm_27.model.AmTr_v1.0_scaffold00061.83.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351 IEAInterProtranscription, DNA-templated

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046983 IEAInterProprotein dimerization activity
GO:0003677 IEAInterProDNA binding
GO:0003899 IEAInterProDNA-directed 5'-3' RNA polymerase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005665 IEAPLAZA Integrative OrthologyDNA-directed RNA polymerase II, core complexAT3G52090
GO:0016591 IEAPLAZA Integrative OrthologyDNA-directed RNA polymerase II, holoenzymeAT3G52090
GO:0000418 IEAPLAZA Integrative OrthologyDNA-directed RNA polymerase IV complexAT3G52090
GO:0000419 IEAPLAZA Integrative OrthologyDNA-directed RNA polymerase V complexAT3G52090

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR009025DNA-directed RNA polymerase, RBP11-like dimerisation domain
IPR008193DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site

Mapman id Description
15.1.6.9.RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 11
No SignalP domains detected for this gene.