Gene: ATR0751G029 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0751G029
Transcript Identifier
ATR0751G029.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00061 : 1579563-1587245 : negative

Family

Gene family
HOM04M000615
(203 genes in 29 species)
specific family
Subfamily
ORTHO04M002734
(65 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00061.96
idevm_27.TU.AmTr_v1.0_scaffold00061.96.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00061.96
nameevm_27.model.AmTr_v1.0_scaffold00061.96
pacid31564759
tidevm_27.model.AmTr_v1.0_scaffold00061.96.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009058 IEAInterProbiosynthetic process
GO:0005978 IEAInterProglycogen biosynthetic process
GO:0000103 IEAPLAZA Integrative Orthologysulfate assimilationAT1G05610
GO:0009970 IEAPLAZA Integrative Orthologycellular response to sulfate starvationAT1G05610
GO:0019252 IEAPLAZA Integrative Orthologystarch biosynthetic processAT5G48300
GO:0048573 IEAPLAZA Integrative Orthologyphotoperiodism, floweringAT5G48300

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016779 IEAInterPronucleotidyltransferase activity
GO:0008878 IEAInterProglucose-1-phosphate adenylyltransferase activity
GO:0004781 IEAPLAZA Integrative Orthologysulfate adenylyltransferase (ATP) activityAT1G05610

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT1G05610
GO:0048046 IEAPLAZA Integrative OrthologyapoplastAT5G48300
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT5G48300
GO:0030931 IEAPLAZA Integrative Orthologyheterotetrameric ADPG pyrophosphorylase complexAT5G48300
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT5G48300

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR029044Nucleotide-diphospho-sugar transferases
IPR005835Nucleotidyl transferase domain
IPR005836ADP-glucose pyrophosphorylase, conserved site
IPR011004Trimeric LpxA-like
IPR011831Glucose-1-phosphate adenylyltransferase

Mapman id Description
3.2.2.3.Carbohydrate metabolism.starch metabolism.biosynthesis.ADP-glucose pyrophosphorylase
No SignalP domains detected for this gene.