Gene: ATR0743G008 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0743G008
Transcript Identifier
ATR0743G008.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00066 : 377879-399405 : positive

Family

Gene family
HOM04M002340
(69 genes in 29 species)
specific family
Subfamily
ORTHO04M002943
(61 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00066.21
idevm_27.TU.AmTr_v1.0_scaffold00066.21.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00066.21
nameevm_27.model.AmTr_v1.0_scaffold00066.21
pacid31564037
tidevm_27.model.AmTr_v1.0_scaffold00066.21.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009098 IEAInterProleucine biosynthetic process
GO:0019752 IEAInterProcarboxylic acid metabolic process
GO:0009414 IEAPLAZA Integrative Orthologyresponse to water deprivationAT5G23010
GO:0009625 IEAPLAZA Integrative Orthologyresponse to insectAT5G23010
GO:0019761 IEAPLAZA Integrative Orthologyglucosinolate biosynthetic processAT5G23020

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824 IEAInterProcatalytic activity
GO:0003852 IEAInterPro2-isopropylmalate synthase activity
GO:0046912 IEAInterProtransferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
GO:0010177 IEAPLAZA Integrative Orthology2-(2'-methylthio)ethylmalate synthase activityAT5G23020

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT1G74040
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT1G18500
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT1G18500

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013785Aldolase-type TIM barrel
IPR0056712-isopropylmalate synthase, bacterial-type
IPR000891Pyruvate carboxyltransferase
IPR0137092-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
IPR002034Alpha-isopropylmalate/homocitrate synthase, conserved site

Mapman id Description
4.1.3.2.5.1.Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.leucine.2-isopropylmalate synthase
No SignalP domains detected for this gene.