Gene: ATR0721G040 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0721G040
Transcript Identifier
ATR0721G040.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00053 : 404521-412363 : negative

Family

Gene family
HOM04M004190
(43 genes in 29 species)
specific family
Subfamily
ORTHO04M006058
(38 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00053.23
idevm_27.TU.AmTr_v1.0_scaffold00053.23.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00053.23
nameevm_27.model.AmTr_v1.0_scaffold00053.23
pacid31554999
tidevm_27.model.AmTr_v1.0_scaffold00053.23.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114 IEAInterProoxidation-reduction process
GO:0019853 IEAPLAZA Integrative OrthologyL-ascorbic acid biosynthetic processAT3G47930

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824 IEAInterProcatalytic activity
GO:0050660 IEAInterProflavin adenine dinucleotide binding
GO:0016899 IEAInterProoxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor
GO:0003885 IEAInterProD-arabinono-1,4-lactone oxidase activity
GO:0016491 IEAInterProoxidoreductase activity
GO:0016614 IEAInterProoxidoreductase activity, acting on CH-OH group of donors
GO:0016633 IEAInterProgalactonolactone dehydrogenase activity
GO:0080049 IEAPLAZA Integrative OrthologyL-gulono-1,4-lactone dehydrogenase activityAT3G47930

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020 IEAInterPromembrane
GO:0009536 IEAPLAZA Integrative OrthologyplastidAT3G47930
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT3G47930

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016170Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain
IPR016167FAD-binding, type 2, subdomain 1
IPR016169CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
IPR010031L-gulonolactone/D-arabinono-1,4-lactone oxidase
IPR007173D-arabinono-1,4-lactone oxidase
IPR006094FAD linked oxidase, N-terminal
IPR016166FAD-binding, type 2
IPR010029Galactonolactone dehydrogenase

Mapman id Description
10.3.1.8.Redox homeostasis.low-molecular-weight scavengers.ascorbate biosynthesis.L-galactono-1,4-lactone dehydrogenase (GLDH)
No SignalP domains detected for this gene.