Gene: ATR0716G023 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0716G023
Transcript Identifier
ATR0716G023.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00052 : 2650679-2670792 : negative

Family

Gene family
HOM04M001947
(79 genes in 28 species)
specific family
Subfamily
ORTHO04M008470
(30 genes in 26 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00052.77
idevm_27.TU.AmTr_v1.0_scaffold00052.77.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00052.77
nameevm_27.model.AmTr_v1.0_scaffold00052.77
pacid31574054
tidevm_27.model.AmTr_v1.0_scaffold00052.77.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114 IEAInterProoxidation-reduction process
GO:0016117 IEAInterProcarotenoid biosynthetic process
GO:0016123 IEAPLAZA Integrative Orthologyxanthophyll biosynthetic processAT5G57030
GO:0009765 IEAPLAZA Integrative Orthologyphotosynthesis, light harvestingAT5G57030

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016491 IEAInterProoxidoreductase activity
GO:0016705 IEAInterProoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0045435 IEAPLAZA Integrative Orthologylycopene epsilon cyclase activityAT5G57030

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT5G57030

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR023753FAD/NAD(P)-binding domain
IPR010108Lycopene cyclase, beta/epsilon

Mapman id Description
9.1.6.1.5.Secondary metabolism.terpenoids.carotenoid biosynthesis.carotenes.lycopene epsilon cyclase (LCY-e)
No SignalP domains detected for this gene.