Gene: ATR0706G080 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0706G080
Transcript Identifier
ATR0706G080.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00057 : 4527818-4542089 : negative

Family

Gene family
HOM04M000089
(940 genes in 28 species)
specific family
Subfamily
ORTHO04M000042
(839 genes in 28 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00057.290
idevm_27.TU.AmTr_v1.0_scaffold00057.290.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00057.290
nameevm_27.model.AmTr_v1.0_scaffold00057.290
pacid31574237
tidevm_27.model.AmTr_v1.0_scaffold00057.290.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975 IEAInterProcarbohydrate metabolic process
GO:0080167 IEAPLAZA Integrative Orthologyresponse to karrikinAT1G60090
GO:0046283 IEAPLAZA Integrative Orthologyanthocyanin-containing compound metabolic processAT4G27830

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004553 IEAInterProhydrolase activity, hydrolyzing O-glycosyl compounds

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT4G27830
GO:0005777 IEAPLAZA Integrative OrthologyperoxisomeAT4G27820

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001360Glycoside hydrolase family 1
IPR033132Glycosyl hydrolases family 1, N-terminal conserved site
IPR017853Glycoside hydrolase superfamily

Mapman id Description
50.3.2.Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase
No SignalP domains detected for this gene.