Gene: ATR0705G149 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0705G149
Transcript Identifier
ATR0705G149.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00056 : 3299166-3311334 : negative

Family

Gene family
HOM04M001648
(91 genes in 29 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00056.171
idevm_27.TU.AmTr_v1.0_scaffold00056.171.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00056.171
nameevm_27.model.AmTr_v1.0_scaffold00056.171
pacid31568309
tidevm_27.model.AmTr_v1.0_scaffold00056.171.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006623 IEAInterProprotein targeting to vacuole

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0030276 IEAInterProclathrin binding
GO:0005543 IEAPLAZA Integrative Orthologyphospholipid bindingAT5G11710
GO:0002020 IEAPLAZA Integrative Orthologyprotease bindingAT5G11710
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G11710

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009579 IEAPLAZA Integrative OrthologythylakoidAT5G11710
GO:0005884 IEAPLAZA Integrative Orthologyactin filamentAT5G11710
GO:0005794 IEAPLAZA Integrative OrthologyGolgi apparatusAT5G11710

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR008942ENTH/VHS
IPR033521Clathrin interactor EPSIN 1
IPR013809ENTH domain

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.