Gene: ATR0697G089 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0697G089
Transcript Identifier
ATR0697G089.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00004 : 1083548-1103506 : positive

Family

Gene family
HOM04M002523
(64 genes in 29 species)
specific family
Subfamily
ORTHO04M003536
(54 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00004.75
idevm_27.TU.AmTr_v1.0_scaffold00004.75.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00004.75
nameevm_27.model.AmTr_v1.0_scaffold00004.75
pacid31550358
tidevm_27.model.AmTr_v1.0_scaffold00004.75.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0070897 IEAInterProDNA-templated transcriptional preinitiation complex assembly
GO:0006383 IEAInterProtranscription from RNA polymerase III promoter
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT2G01280

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0001026 IEAInterProTFIIIB-type transcription factor activity
GO:0017025 IEAInterProTBP-class protein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000126 IEAInterProtranscription factor TFIIIB complex

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR013763Cyclin-like
IPR000812Transcription factor TFIIB
IPR029529Transcription factor IIIB subunit Brf1
IPR013150Transcription factor TFIIB, cyclin-like domain
IPR011665Brf1, TBP-binding domain

Mapman id Description
15.4.3.1.RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIb transcription factor complex.component BRF1
No SignalP domains detected for this gene.