Gene: ATR0697G029 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0697G029
Transcript Identifier
ATR0697G029.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00004 : 10428602-10429444 : positive

Family

Gene family
HOM04M000438
(263 genes in 29 species)
specific family
Subfamily
ORTHO04M000431
(215 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00004.302
idevm_27.TU.AmTr_v1.0_scaffold00004.302.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00004.302
nameevm_27.model.AmTr_v1.0_scaffold00004.302
pacid31550521
tidevm_27.model.AmTr_v1.0_scaffold00004.302.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010029 IEAPLAZA Integrative Orthologyregulation of seed germinationAT1G08970
GO:0009740 IEAPLAZA Integrative Orthologygibberellic acid mediated signaling pathwayAT1G08970
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT1G56170
GO:2000306 IEAPLAZA Integrative Orthologypositive regulation of photomorphogenesisAT1G08970
GO:0009738 IEAPLAZA Integrative Orthologyabscisic acid-activated signaling pathwayAT1G08970

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046982 IEAInterProprotein heterodimerization activity
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT1G08970
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G56170

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT1G08970
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT1G56170
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G56170

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003958Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072Histone-fold

Mapman id Description
15.5.51.3.RNA biosynthesis.transcriptional regulation.NF-Y transcription factor complex.component NF-YC
No SignalP domains detected for this gene.