Gene: ATR0686G011 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0686G011
Transcript Identifier
ATR0686G011.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00005 : 4544082-4579840 : positive

Family

Gene family
HOM04M006823
(30 genes in 26 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00005.96
idevm_27.TU.AmTr_v1.0_scaffold00005.96.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00005.96
nameevm_27.model.AmTr_v1.0_scaffold00005.96
pacid31575985
tidevm_27.model.AmTr_v1.0_scaffold00005.96.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114 IEAInterProoxidation-reduction process
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT5G14220
GO:0006779 IEAPLAZA Integrative Orthologyporphyrin-containing compound biosynthetic processAT5G14220

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016491 IEAInterProoxidoreductase activity
GO:0004729 IEAPLAZA Homology (enrichment)oxygen-dependent protoporphyrinogen oxidase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009536 IEAPLAZA Integrative OrthologyplastidAT5G14220
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT5G14220
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT5G14220
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT5G14220

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR002937Amine oxidase
IPR023753FAD/NAD(P)-binding domain

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.