Gene: ATR0680G007 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0680G007
Transcript Identifier
ATR0680G007.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00009 : 1744906-1861161 : positive

Family

Gene family
HOM04M000317
(337 genes in 28 species)
specific family
Subfamily
ORTHO04M000220
(319 genes in 28 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00009.73
idevm_27.TU.AmTr_v1.0_scaffold00009.73.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00009.73
nameevm_27.model.AmTr_v1.0_scaffold00009.73
pacid31568749
tidevm_27.model.AmTr_v1.0_scaffold00009.73.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055085 IEAInterProtransmembrane transport
GO:0006817 IEAInterProphosphate ion transport
GO:0016036 IEAPLAZA Integrative Orthologycellular response to phosphate starvationAT5G43350
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT2G38940
GO:1901684 IEAPLAZA Integrative Orthologyarsenate ion transmembrane transportAT5G43350

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0022857 IEAInterProtransmembrane transporter activity
GO:0005315 IEAInterProinorganic phosphate transmembrane transporter activity
GO:0015415 IEAPLAZA Integrative OrthologyATPase-coupled phosphate ion transmembrane transporter activityAT1G76430
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT2G38940
GO:1901683 IEAPLAZA Integrative Orthologyarsenate ion transmembrane transporter activityAT5G43350
GO:0015114 IEAPLAZA Integrative Orthologyphosphate ion transmembrane transporter activityAT5G43350

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021 IEAInterProintegral component of membrane
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT2G38940
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT2G38940
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT2G38940
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT2G38940
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT2G38940
GO:0005794 IEAPLAZA Integrative OrthologyGolgi apparatusAT2G38940

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR020846Major facilitator superfamily domain
IPR005828Major facilitator, sugar transporter-like
IPR004738Phosphate permease

Mapman id Description
24.2.2.6.Solute transport.carrier-mediated transport.MFS superfamily.phosphate transporter (PHT1)
25.3.2.1.Nutrient uptake.phosphorus assimilation.phosphate uptake.phosphate transporter (PHT1)
No SignalP domains detected for this gene.