Gene: ATR0665G208 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0665G208
Transcript Identifier
ATR0665G208.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00002 : 5263644-5275799 : positive

Family

Gene family
HOM04M005920
(34 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00002.278
idevm_27.TU.AmTr_v1.0_scaffold00002.278.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00002.278
nameevm_27.model.AmTr_v1.0_scaffold00002.278
pacid31562275
tidevm_27.model.AmTr_v1.0_scaffold00002.278.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114 IEAInterProoxidation-reduction process
GO:0009853 IEAPLAZA Integrative OrthologyphotorespirationAT4G36400
GO:0006807 IEAPLAZA Integrative Orthologynitrogen compound metabolic processAT4G36400

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824 IEAInterProcatalytic activity
GO:0050660 IEAInterProflavin adenine dinucleotide binding
GO:0016491 IEAInterProoxidoreductase activity
GO:0016614 IEAInterProoxidoreductase activity, acting on CH-OH group of donors
GO:0047545 IEAPLAZA Integrative Orthology2-hydroxyglutarate dehydrogenase activityAT4G36400
GO:0051990 IEAPLAZA Integrative Orthology(R)-2-hydroxyglutarate dehydrogenase activityAT4G36400

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT4G36400

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR016167FAD-binding, type 2, subdomain 1
IPR016169CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
IPR016171Vanillyl-alcohol oxidase, C-terminal subdomain 2
IPR006094FAD linked oxidase, N-terminal
IPR004113FAD-linked oxidase, C-terminal
IPR016166FAD-binding, type 2
IPR016164FAD-linked oxidase-like, C-terminal

Mapman id Description
50.1.1.Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor
No SignalP domains detected for this gene.