Gene: ATR0661G260 (Amborella trichopoda)

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Gene Identifier
ATR0661G260
Transcript Identifier
ATR0661G260.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00001 : 3151330-3153763 : positive

Family

Gene family
HOM04M004795
(39 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00001.178
idevm_27.TU.AmTr_v1.0_scaffold00001.178.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00001.178
nameevm_27.model.AmTr_v1.0_scaffold00001.178
pacid31551352
tidevm_27.model.AmTr_v1.0_scaffold00001.178.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0001522 IEAInterPropseudouridine synthesis
GO:0009451 IEAInterProRNA modification

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003723 IEAInterProRNA binding
GO:0009982 IEAInterPropseudouridine synthase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT1G20370

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR020095Pseudouridine synthase I, TruA, C-terminal
IPR001406Pseudouridine synthase I, TruA
IPR020097Pseudouridine synthase I, TruA, alpha/beta domain
IPR020103Pseudouridine synthase, catalytic domain

Mapman id Description
16.6.3.1.RNA processing.tRNA modification.pseudouridylation.tRNA pseudouridine synthase (TruA)
No SignalP domains detected for this gene.