Gene: ATR0626G308 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0626G308
Transcript Identifier
ATR0626G308.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00025 : 1927967-1928986 : negative

Family

Gene family
HOM04M000572
(215 genes in 27 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00025.141
idevm_27.TU.AmTr_v1.0_scaffold00025.141.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00025.141
nameevm_27.model.AmTr_v1.0_scaffold00025.141
pacid31566439
tidevm_27.model.AmTr_v1.0_scaffold00025.141.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0071668 IEAPLAZA Tree-based Orthologyplant-type cell wall assemblyAT1G02720
GO:0048354 IEAPLAZA Tree-based Orthologymucilage biosynthetic process involved in seed coat developmentAT1G02720
GO:0048366 IEAPLAZA Tree-based Orthologyleaf developmentAT1G19300
GO:0010051 IEAPLAZA Tree-based Orthologyxylem and phloem pattern formationAT1G19300
GO:0052386 IEAPLAZA Tree-based Orthologycell wall thickeningAT1G19300
GO:0010417 IEAPLAZA Tree-based Orthologyglucuronoxylan biosynthetic processAT1G19300
GO:0032504 IEAPLAZA Tree-based Orthologymulticellular organism reproductionAT1G19300
GO:0006979 IEAPLAZA Tree-based Orthologyresponse to oxidative stressAT3G28340
GO:0048363 IEAPLAZA Tree-based Orthologymucilage pectin metabolic processAT1G02720

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016757 IEAInterProtransferase activity, transferring glycosyl groups

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0090406 IEAPLAZA Integrative Orthologypollen tubeAT3G06260
GO:0005783 IEAPLAZA Tree-based Orthologyendoplasmic reticulumAT1G02720
GO:0005794 IEAPLAZA Tree-based OrthologyGolgi apparatusAT1G02720

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR029044Nucleotide-diphospho-sugar transferases
IPR002495Glycosyl transferase, family 8

Mapman id Description
21.2.2.1.1.Cell wall organisation.hemicellulose.xylan.biosynthesis.galacturonosyltransferase
No SignalP domains detected for this gene.