Gene: ATR0626G298 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0626G298
Transcript Identifier
ATR0626G298.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00025 : 3987163-3987890 : negative

Family

Gene family
HOM04M000818
(163 genes in 23 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00025.271
idevm_27.TU.AmTr_v1.0_scaffold00025.271.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00025.271
nameevm_27.model.AmTr_v1.0_scaffold00025.271
pacid31566437
tidevm_27.model.AmTr_v1.0_scaffold00025.271.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0045944 IEAPLAZA Homology (enrichment)positive regulation of transcription from RNA polymerase II promoter

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0046983 IEAInterProprotein dimerization activity
GO:0000982 IEAPLAZA Homology (enrichment)transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0000987 IEAPLAZA Homology (enrichment)core promoter proximal region sequence-specific DNA binding

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR002100Transcription factor, MADS-box

Mapman id Description
15.5.14.RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)
No SignalP domains detected for this gene.