Gene: ATR0626G140 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0626G140
Transcript Identifier
ATR0626G140.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00025 : 3328367-3341036 : positive

Family

Gene family
HOM04M005861
(34 genes in 27 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00025.232
idevm_27.TU.AmTr_v1.0_scaffold00025.232.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00025.232
nameevm_27.model.AmTr_v1.0_scaffold00025.232
pacid31566597
tidevm_27.model.AmTr_v1.0_scaffold00025.232.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008152 IEAInterPrometabolic process
GO:0006012 IEAInterProgalactose metabolic process
GO:0046835 IEAInterProcarbohydrate phosphorylation
GO:0046396 IEAPLAZA Integrative OrthologyD-galacturonate metabolic processAT3G10700

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005534 IEAInterProgalactose binding
GO:0005524 IEAInterProATP binding
GO:0016301 IEAInterProkinase activity
GO:0016773 IEAInterProphosphotransferase activity, alcohol group as acceptor
GO:0004335 IEAInterProgalactokinase activity
GO:0047912 IEAPLAZA Integrative Orthologygalacturonokinase activityAT3G10700

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IEAInterProcytoplasm
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT3G10700

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR013750GHMP kinase, C-terminal domain
IPR014721Ribosomal protein S5 domain 2-type fold, subgroup
IPR019539Galactokinase galactose-binding domain
IPR006204GHMP kinase N-terminal domain
IPR006206Mevalonate/galactokinase
IPR000705Galactokinase
IPR020568Ribosomal protein S5 domain 2-type fold

Mapman id Description
3.13.4.2.1.Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-galacturonic acid biosynthesis.salvage biosynthesis.galacturonokinase
No SignalP domains detected for this gene.