Gene: ATR0618G344 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0618G344
Transcript Identifier
ATR0618G344.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00029 : 1201969-1204275 : negative

Family

Gene family
HOM04M002972
(56 genes in 26 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00029.93
idevm_27.TU.AmTr_v1.0_scaffold00029.93.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00029.93
nameevm_27.model.AmTr_v1.0_scaffold00029.93
pacid31549907
tidevm_27.model.AmTr_v1.0_scaffold00029.93.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114 IEAInterProoxidation-reduction process
GO:0016132 IEAPLAZA Integrative Orthologybrassinosteroid biosynthetic processAT3G19820
GO:0009808 IEAPLAZA Integrative Orthologylignin metabolic processAT3G19820
GO:0009826 IEAPLAZA Integrative Orthologyunidimensional cell growthAT3G19820
GO:0009414 IEAPLAZA Tree-based Orthologyresponse to water deprivationSolyc02g030170.2
GO:0009416 IEAPLAZA Integrative Orthologyresponse to light stimulusAT3G19820
GO:0009834 IEAPLAZA Integrative Orthologyplant-type secondary cell wall biogenesisAT3G19820
GO:0006694 IEAPLAZA Integrative Orthologysteroid biosynthetic processAT3G19820

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0050660 IEAInterProflavin adenine dinucleotide binding
GO:0016491 IEAInterProoxidoreductase activity
GO:0003824 IEAInterProcatalytic activity
GO:0016614 IEAInterProoxidoreductase activity, acting on CH-OH group of donors
GO:0005516 IEAPLAZA Integrative Orthologycalmodulin bindingAT3G19820

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021 IEAPLAZA Integrative Orthologyintegral component of membraneAT3G19820
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT3G19820
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT3G19820
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT3G19820
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneAT3G19820

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR016169CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
IPR006094FAD linked oxidase, N-terminal
IPR016166FAD-binding, type 2

Mapman id Description
5.5.1.7.Lipid metabolism.phytosterol biosynthesis.campesterol.sterol delta24 reductase
No SignalP domains detected for this gene.