Gene: ATR0618G290 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0618G290
Transcript Identifier
ATR0618G290.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00029 : 1082041-1091545 : positive

Family

Gene family
HOM04M000279
(367 genes in 26 species)
specific family
Subfamily
ORTHO04M001440
(96 genes in 23 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00029.85
idevm_27.TU.AmTr_v1.0_scaffold00029.85.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00029.85
nameevm_27.model.AmTr_v1.0_scaffold00029.85
pacid31550028
tidevm_27.model.AmTr_v1.0_scaffold00029.85.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:2000214 IEAPLAZA Tree-based Orthologyregulation of proline metabolic processAT1G61660
GO:0042631 IEAPLAZA Tree-based Orthologycellular response to water deprivationAT1G61660
GO:0006355 IEAPLAZA Tree-based Orthologyregulation of transcription, DNA-templatedAT4G29100
GO:2000377 IEAPLAZA Tree-based Orthologyregulation of reactive oxygen species metabolic processAT1G61660
GO:0071215 IEAPLAZA Tree-based Orthologycellular response to abscisic acid stimulusAT1G61660
GO:0045893 IEAPLAZA Tree-based Orthologypositive regulation of transcription, DNA-templatedAT1G61660
GO:0071472 IEAPLAZA Tree-based Orthologycellular response to salt stressAT1G61660
GO:0009739 IEAPLAZA Tree-based Orthologyresponse to gibberellinAT2G31730

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046983 IEAInterProprotein dimerization activity
GO:0043565 IEAPLAZA Tree-based Orthologysequence-specific DNA bindingAT1G61660
GO:0005515 IEAPLAZA Tree-based Orthologyprotein bindingAT1G61660
GO:0001046 IEAPLAZA Tree-based Orthologycore promoter sequence-specific DNA bindingAT1G61660

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT4G05170

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain

Mapman id Description
15.5.32.RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)
No SignalP domains detected for this gene.