Gene: ATR0618G152 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0618G152
Transcript Identifier
ATR0618G152.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00029 : 5385526-5397487 : positive

Family

Gene family
HOM04M000675
(190 genes in 29 species)
specific family
Subfamily
ORTHO04M000561
(179 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00029.399
idevm_27.TU.AmTr_v1.0_scaffold00029.399.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00029.399
nameevm_27.model.AmTr_v1.0_scaffold00029.399
pacid31549990
tidevm_27.model.AmTr_v1.0_scaffold00029.399.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007010 IEAInterProcytoskeleton organization
GO:0051017 IEAInterProactin filament bundle assembly
GO:0007015 IEAPLAZA Integrative Orthologyactin filament organizationAT2G29890
GO:0045010 IEAPLAZA Integrative Orthologyactin nucleationAT2G29890
GO:0030042 IEAPLAZA Integrative Orthologyactin filament depolymerizationAT2G29890
GO:0051014 IEAPLAZA Integrative Orthologyactin filament severingAT2G29890
GO:0051016 IEAPLAZA Integrative Orthologybarbed-end actin filament cappingAT2G29890
GO:0030835 IEAPLAZA Integrative Orthologynegative regulation of actin filament depolymerizationAT2G29890

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003779 IEAInterProactin binding
GO:0051015 IEAInterProactin filament binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0015629 IEAPLAZA Integrative Orthologyactin cytoskeletonAT2G29890

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR029006ADF-H/Gelsolin-like domain
IPR003128Villin headpiece
IPR030010Villin-1, plant
IPR007122Villin/Gelsolin
IPR007123Gelsolin-like domain

Mapman id Description
20.2.2.5.Cytoskeleton organisation.microfilament network.actin polymerisation.villin actin-crosslinking factor
No SignalP domains detected for this gene.