Gene: ATR0618G147 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0618G147
Transcript Identifier
ATR0618G147.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00029 : 2410874-2423642 : positive

Family

Gene family
HOM04M000105
(811 genes in 27 species)
specific family
Subfamily
ORTHO04M000681
(159 genes in 27 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00029.187
idevm_27.TU.AmTr_v1.0_scaffold00029.187.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00029.187
nameevm_27.model.AmTr_v1.0_scaffold00029.187
pacid31549945
tidevm_27.model.AmTr_v1.0_scaffold00029.187.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0009725 IEAInterProresponse to hormone
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT5G37020
GO:0009908 IEAPLAZA Integrative Orthologyflower developmentAT5G37020

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0005515 IEAInterProprotein binding
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT5G37020
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT5G37020

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAInterPronucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003340B3 DNA binding domain
IPR015300DNA-binding pseudobarrel domain
IPR010525Auxin response factor
IPR033389AUX/IAA domain
IPR000270PB1 domain

Mapman id Description
15.5.5.1.RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (ARF)
No SignalP domains detected for this gene.