Gene: ATR0609G120 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0609G120
Transcript Identifier
ATR0609G120.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00020 : 14066-51980 : negative

Family

Gene family
HOM04M006566
(32 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00020.2
idevm_27.TU.AmTr_v1.0_scaffold00020.2.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00020.2
nameevm_27.model.AmTr_v1.0_scaffold00020.2
pacid31554709
tidevm_27.model.AmTr_v1.0_scaffold00020.2.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0034337 IEAPLAZA Integrative OrthologyRNA foldingAT3G23700
GO:0032508 IEAPLAZA Integrative OrthologyDNA duplex unwindingAT3G23700
GO:0000481 IEAPLAZA Integrative Orthologymaturation of 5S rRNAAT3G23700
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT3G23700
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT3G23700

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676 IEAInterPronucleic acid binding
GO:0003729 IEAPLAZA Integrative OrthologymRNA bindingAT3G23700

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT3G23700
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT3G23700
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT3G23700

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003029S1 domain
IPR022967RNA-binding domain, S1
IPR012340Nucleic acid-binding, OB-fold

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.