Gene: ATR0605G318 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0605G318
Transcript Identifier
ATR0605G318.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00022 : 2580228-2580596 : positive

Family

Gene family
HOM04M000398
(285 genes in 27 species)
specific family
Subfamily
ORTHO04M011272
(12 genes in 6 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00022.168
idevm_27.TU.AmTr_v1.0_scaffold00022.168.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00022.168
nameevm_27.model.AmTr_v1.0_scaffold00022.168
pacid31552401
tidevm_27.model.AmTr_v1.0_scaffold00022.168.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114 IEAInterProoxidation-reduction process
GO:0009690 IEAPLAZA Homology (enrichment)cytokinin metabolic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824 IEAInterProcatalytic activity
GO:0050660 IEAInterProflavin adenine dinucleotide binding
GO:0016491 IEAInterProoxidoreductase activity
GO:0016614 IEAInterProoxidoreductase activity, acting on CH-OH group of donors
GO:0019139 IEAPLAZA Homology (enrichment)cytokinin dehydrogenase activity

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR016167FAD-binding, type 2, subdomain 1
IPR016169CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
IPR006094FAD linked oxidase, N-terminal
IPR016166FAD-binding, type 2

Mapman id Description
11.4.3.2.Phytohormone action.cytokinin.conjugation and degradation.cytokinin dehydrogenase
No SignalP domains detected for this gene.