Gene: ATR0598G189 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0598G189
Transcript Identifier
ATR0598G189.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00024 : 1948900-1950344 : negative

Family

Gene family
HOM04M000112
(760 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00024.83
idevm_27.TU.AmTr_v1.0_scaffold00024.83.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00024.83
nameevm_27.model.AmTr_v1.0_scaffold00024.83
pacid31558602
tidevm_27.model.AmTr_v1.0_scaffold00024.83.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009414 IEAPLAZA Integrative Orthologyresponse to water deprivationAT1G17950
GO:2000652 IEAPLAZA Integrative Orthologyregulation of secondary cell wall biogenesisAT1G73410
GO:1901348 IEAPLAZA Integrative Orthologypositive regulation of secondary cell wall biogenesisAT1G17950
GO:0009834 IEAPLAZA Integrative Orthologyplant-type secondary cell wall biogenesisAT1G17950
GO:1901347 IEAPLAZA Integrative Orthologynegative regulation of secondary cell wall biogenesisAT1G17950
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT4G33450
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT1G17950
GO:1902074 IEAPLAZA Integrative Orthologyresponse to saltAT1G17950

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0044212 IEAPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT1G73410

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G73410

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.