Gene: ATR0582G007 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0582G007
Transcript Identifier
ATR0582G007.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00016 : 2703406-2711939 : positive

Family

Gene family
HOM04M000105
(811 genes in 27 species)
specific family
Subfamily
ORTHO04M000303
(270 genes in 27 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00016.128
idevm_27.TU.AmTr_v1.0_scaffold00016.128.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00016.128
nameevm_27.model.AmTr_v1.0_scaffold00016.128
pacid31569795
tidevm_27.model.AmTr_v1.0_scaffold00016.128.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0009725 IEAInterProresponse to hormone
GO:0010047 IEAPLAZA Integrative Orthologyfruit dehiscenceAT5G62000
GO:0048481 IEAPLAZA Integrative Orthologyplant ovule developmentAT5G62000
GO:0010227 IEAPLAZA Integrative Orthologyfloral organ abscissionAT5G62000
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT5G62000
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT5G62000
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT1G43950
GO:0009911 IEAPLAZA Integrative Orthologypositive regulation of flower developmentAT5G62000
GO:1903288 IEAPLAZA Integrative Orthologypositive regulation of potassium ion importAT5G62000
GO:0008285 IEAPLAZA Integrative Orthologynegative regulation of cell proliferationAT5G62000
GO:0010150 IEAPLAZA Integrative Orthologyleaf senescenceAT5G62000

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0005515 IEAInterProprotein binding
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT5G62000
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT5G62000
GO:0044212 IEAPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT1G35540

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAInterPronucleus
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT1G43950

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003340B3 DNA binding domain
IPR015300DNA-binding pseudobarrel domain
IPR033389AUX/IAA domain
IPR010525Auxin response factor
IPR000270PB1 domain

Mapman id Description
15.5.5.1.RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (ARF)
No SignalP domains detected for this gene.