Gene: ATR0564G511 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0564G511
Transcript Identifier
ATR0564G511.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00010 : 1943515-1947072 : positive

Family

Gene family
HOM04M000306
(341 genes in 27 species)
specific family
Subfamily
ORTHO04M000219
(319 genes in 27 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00010.98
idevm_27.TU.AmTr_v1.0_scaffold00010.98.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00010.98
nameevm_27.model.AmTr_v1.0_scaffold00010.98
pacid31573062
tidevm_27.model.AmTr_v1.0_scaffold00010.98.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055085 IEAInterProtransmembrane transport
GO:0010540 IEAPLAZA Integrative Orthologybasipetal auxin transportAT1G77110
GO:0010105 IEAPLAZA Integrative Orthologynegative regulation of ethylene-activated signaling pathwayAT1G77110
GO:0010229 IEAPLAZA Integrative Orthologyinflorescence developmentAT1G73590
GO:0048825 IEAPLAZA Integrative Orthologycotyledon developmentAT1G73590
GO:0048826 IEAPLAZA Integrative Orthologycotyledon morphogenesisAT1G73590
GO:0048767 IEAPLAZA Integrative Orthologyroot hair elongationAT1G77110
GO:1901332 IEAPLAZA Integrative Orthologynegative regulation of lateral root developmentAT1G77110
GO:0010051 IEAPLAZA Integrative Orthologyxylem and phloem pattern formationAT1G73590
GO:0032880 IEAPLAZA Integrative Orthologyregulation of protein localizationAT1G73590
GO:0009640 IEAPLAZA Integrative OrthologyphotomorphogenesisAT1G73590
GO:0051726 IEAPLAZA Integrative Orthologyregulation of cell cycleAT1G73590
GO:0010338 IEAPLAZA Integrative Orthologyleaf formationAT1G73590
GO:0010358 IEAPLAZA Integrative Orthologyleaf shapingAT1G73590
GO:0009908 IEAPLAZA Integrative Orthologyflower developmentAT1G73590
GO:0048367 IEAPLAZA Integrative Orthologyshoot system developmentAT1G73590
GO:0009909 IEAPLAZA Integrative Orthologyregulation of flower developmentAT1G73590
GO:0009926 IEAPLAZA Integrative Orthologyauxin polar transportAT1G73590
GO:0048364 IEAPLAZA Integrative Orthologyroot developmentAT1G73590
GO:0009630 IEAPLAZA Integrative OrthologygravitropismAT1G73590
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT1G73590

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G73590
GO:0003755 IEAPLAZA Integrative Orthologypeptidyl-prolyl cis-trans isomerase activityAT1G73590
GO:0005215 IEAPLAZA Integrative Orthologytransporter activityAT1G73590

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021 IEAInterProintegral component of membrane
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT1G73590
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT1G73590
GO:0009505 IEAPLAZA Integrative Orthologyplant-type cell wallAT1G73590
GO:0005783 IEAPLAZA Integrative Orthologyendoplasmic reticulumAT1G73590
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT1G73590
GO:0045177 IEAPLAZA Integrative Orthologyapical part of cellAT1G73590
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT1G73590
GO:0009925 IEAPLAZA Integrative Orthologybasal plasma membraneAT1G73590

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004776Membrane transport protein
IPR014024Auxin efflux carrier, plant type

Mapman id Description
11.2.4.1.1.Phytohormone action.auxin.transport.polar auxin transport.auxin transporter (PIN)
24.2.5.2.1.Solute transport.carrier-mediated transport.BART superfamily.AEC family.auxin efflux transporter (PIN)
No SignalP domains detected for this gene.