Gene: ATR0564G449 (Amborella trichopoda)

Overview top

Gene Identifier
ATR0564G449
Transcript Identifier
ATR0564G449.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00010 : 8797150-8811499 : negative

Family

Gene family
HOM04M001558
(96 genes in 29 species)
specific family
Subfamily
ORTHO04M008281
(31 genes in 28 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00010.531
idevm_27.TU.AmTr_v1.0_scaffold00010.531.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00010.531
nameevm_27.model.AmTr_v1.0_scaffold00010.531
pacid31572820
tidevm_27.model.AmTr_v1.0_scaffold00010.531.v1.0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511 IEAInterProubiquitin-dependent protein catabolic process
GO:0035435 IEAPLAZA Integrative Orthologyphosphate ion transmembrane transportAT2G04660
GO:0015866 IEAPLAZA Integrative OrthologyADP transportAT2G04660
GO:0015867 IEAPLAZA Integrative OrthologyATP transportAT2G04660
GO:0080121 IEAPLAZA Integrative OrthologyAMP transportAT2G04660
GO:0009561 IEAPLAZA Integrative OrthologymegagametogenesisAT2G04660

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0031625 IEAInterProubiquitin protein ligase binding
GO:0015217 IEAPLAZA Integrative OrthologyADP transmembrane transporter activityAT2G04660
GO:0005509 IEAPLAZA Integrative Orthologycalcium ion bindingAT2G04660
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT2G04660
GO:0005347 IEAPLAZA Integrative OrthologyATP transmembrane transporter activityAT2G04660
GO:0080122 IEAPLAZA Integrative OrthologyAMP transmembrane transporter activityAT2G04660
GO:0015114 IEAPLAZA Integrative Orthologyphosphate ion transmembrane transporter activityAT2G04660

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005819 IEAPLAZA Integrative OrthologyspindleAT2G04660
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT2G04660
GO:0000151 IEAPLAZA Integrative Orthologyubiquitin ligase complexAT2G04660
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT2G04660

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011991Winged helix-turn-helix DNA-binding domain
IPR014786Anaphase-promoting complex subunit 2, C-terminal
IPR001373Cullin, N-terminal
IPR016158Cullin homology

Mapman id Description
13.3.4.1.1.3.1.Cell cycle organisation.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.catalytic core subcomplex.component APC2
No SignalP domains detected for this gene.